A worldwide e-Infrastructure for NMR and structural biology

Request for large scale emi testbed

This is the follow up of the GGUS ticket https://ggus.eu/ws/ticket_info.php?ticket=89884

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Last mail from Björn

Hi Marc, all,

I've run the job through UNICORE submitted via the EMI-ES interface, which was the original use case. It all seems to work quite well.

You can download the resulting gmx-probe.tgz [1].

I don't think you have been registered as users at our site yet. VOMS does not work, so I would directly enter your DNs and map them locally. Let me know how you want to proceed with this.

Best regards,

[1] https://dl.dropboxusercontent.com/u/36305931/gmx-probe.tgz

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WeNMR Expert comment

Hi all, very good job, i

Hi all,
very good job,
i would like now to reproduce your submission from a EMI3 UI here at INFN,
my DN is:
/C=IT/O=INFN/OU=Personal Certificate/L=Padova/CN=Marco Verlato

Could you write me the exact command i should issue from my UI to run a gromacs job to your UNICRE site?

Due to the end of EMI you might have noticed that the GGUS ticket https://ggus.eu/ws/ticket_info.php?ticket=89884
has been set to solved.
I've have created an issue on the WeNMR portal tool: http://www.wenmr.eu/wenmr/help-center/general-issues/wenmr-grid/request-large-scale-emi-testbed
and i would like we continue our exchange of information there.
Let me know if it is OK for you.


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And the following article describing the WeNMR portals should be cited:
Wassenaar et al. (2012). WeNMR: Structural Biology on the Grid.J. Grid. Comp., 10:743-767.


The WeNMR Virtual Research Community has been the first to be officially recognized by the EGI.

European Union

WeNMR is an e-Infrastructure project funded under the 7th framework of the EU. Contract no. 261572

WestLife, the follow up project of WeNMR is a Virtual Research Environment e-Infrastructure project funded under Horizon 2020. Contract no. 675858